Examples of Comparative Biology
Diagrams for the peptide NAD3 from several species are shown here.
It is unclear for the present as to whether these diagrams should be identical to each other.
Examples of non-synonymous mutations are: C10069T A4V T10081C M8T T10084C I9T - common A10086G N10D - common G10143A G29S - common T10114C I19T C10128A L24M A10188G M44V C10192T S45F - common C10192A S45Y G10197A A47T G10203A V49I - common T10216C M53T T10237C I60T C10314G L86V G10320A V88I - common T10321C V88A - common T10324C M89T - common T10326C S90P C10327T S90L T10336C L93S T10345C I96T - common G10365A A103T - common G10373C E105D A10398G T114A - common
Mammal - Human NC_012920
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Amino acid sequences for peptide NAD3:-
1 2 3 4 5 6 7 8 9 0 1
Mammals:
Human - MNFALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMSPARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAYEWLQKGLDWTE - Human
Chimp - MNFVLILMTNTLLALLLMIITFWLPQLNSYMEKSTPYECGFDPMSPARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTANLPLMVTSSLLLITILALSLAYEWLQKGLDWTE - Chimp
Cattle - MNLMLALLTNFTLATLLVIIAFWLPQLNVYSEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTANLNTMLTMALFLIILLAVSLAYEWTQKGLEWTE - Cattle
Bowhead Whale - MNLLLTLLTNTTLALLLVFIAFWLPQLNVYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTNNLNTMLTMALFLISLLAASLAYEWTQEGLEWAE - Bowhead Whale
Killer Whale - MNLLSTLLTNTTLALLLMLIAFWLPQLNAYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEITLLLPLPWAIQTNNLTTMLLMALFLISLLATSLAYEWTQKGLEWNK - Killer Whale
Egyptian Rousette - MNLMLTLFINTLLASLLVLIAFWMPQMNSYAEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDNLKIMLIMSLTLISLLAISLAYEWSHKGLEWAE - Egyptian Rousette
European Hedgehog - MTLMIMIFTNTTLAIMLVIIAFYWPQLNAHVEKISPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPIPWLMNSSNTTTSIMIVLILIMALASSLAYEWMKEGLEWK - European Hedgehog
Yellow-t Marten - MNMMLTMLINVSLASLLVLIAFWLPQLNIYTEKASPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSINLKTTLIMALALISLLALSLAYEWTEEGLEWNE - Yellow Throated Marten
Spotted Seal - MNMALTLFTNTALASLLVLIAFWLPQLNTYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASHTDNLTTMLTMALLLISLLAASLAYEWTEKGLEWTE - Spotted Seal
Giant Panda - MNLILALLTNVLLASLLVLIAFWLPQLNIYAEKVSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWALQTNNLMTMLIMALLLISLLAASLAYEWTEKGLEWAE - Giant Panda
Wallaroo - MINLIITLIINTALSTIIVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLIAITFLLFDLEIALLLPLPWAMQLPTPNLTLILAYCLIILLTAGLAYEWIQKGLEWSE - Wallaroo
Koala - MINLLITLIVNFMLSTIIILIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSLKFFLVAITFLLFDLEIALLLSLPWALQLPHPNMTLVLSYCLIVLLTAGLAYEWSQKGLEWTE - Koala
Numbat - MNLILMLLTNSLLATVVVLIAFWLPQLYLYLEKSSPYECGFDPLGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAMQFTTTSTMLTLSFSLIILLTAGLAYEWFQKGLEWTE - Numbat
Australian Echidna - MNLLISLLINTCLATILVVVAFWLPQLYTYLEKSSPYECGFDPLGSARLPFSLKFFLVAITFLLFDLEIAILLPLPWASQTSSPYLLLGLSGVLLTLLTLGLAYEWLQKGLEWTE - Australian Echidna
Non-mammals:
Zebrafish - MNLFATILIIMTTLSLVLALVSFWLPQMNSDTEKLSPYECGFDPLGSARLPFSLRFFLVAVLFPLFDLEIALLLPLPWGDQLNNPMETLFWAMTVLILLTLGLAYEWAQGGLEWAE - Zebrafish
MarbledLungfish - MNLLIIMAISTILPIILMLLGFWLPTLNPDNEKVSPYECGFDPLGSARLPFSLKFFLVAILFLLFDLEIAILLPLPWALQSTAPIITFLTALLILILLTLGLIYEWLQGGLEWAE - Marbled Lungfish
Green Anole - MNLSSMILITMTISIVLIIISFWLPQLNSDTEKLSPYECGFDPLGNARLPFSLRFFLVAILFLLFDLEIALLLPLPWAINLGSPLQTSTLTSAILVLLTLGLVYEWLQGGLEWAE - Green Anole
Amphioxus - MLSLTYIVGIASALVIILLLVGLHLPSVMPDNEKLSAYECGFDPMGNARLPFSLRFFLVAILFLLFDLEIALILPYPLGVVFSENTFYNYWLVMLLVVVLTFGLMYEWLKGGLEWTE - Amphioxus
Liver Fluke - MLFFAVLGLLFFLIFFLVLVLHAFLWNLDLGIFSGERSWVSSFECGFLSQRVTENYFSYTYFILLVFFVVFDLEVSLLLNMPLQGVLYKNFFSYLFFLVLLGIGFLVEVRRGYVRWTY - Liver Fluke
Bryozoan - MCTWCYHVSTLLLLLITTMTATYQSTEKLSAFECGFHSFDYRTPFSVRFSLLAVVFLVFDAEVALLMPLFLSSMAGMNFQMIAGGVFFLILWAGLIYEWFQGSLSWVI - Bryozoan
Comparative phylogeny:
NC_012920 Homo sapiens Human Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo NC_001643 Pan troglodytes Chimp Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan NC_006853 Bos taurus Cattle Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos NC_005268 Balaena mysticetus Bowhead Whale Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Cetacea; Mysticeti; Balaenidae; Balaena NC_014682 Orcinus orca Killer Whale Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Cetacea; Odontoceti; Delphinidae; Orcinus NC_007393 Rousettus aegyptiacus Egyptian Rousette Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Megachiroptera; Pteropodidae; Pteropodinae; Rousettus NC_002080 Erinaceus europaeus European Hedgehog Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Insectivora; Erinaceidae; Erinaceinae; Erinaceus FJ719367 Martes flavigula Yellow-t Marten Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Mustelidae; Martinae; Martes FJ895151 Phoca largha Spotted Seal Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Phocidae; Phoca NC_009492 Ailuropoda melanoleuca Giant Panda Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda NC_001794 Macropus robustus Wallaroo Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Macropodidae; Macropus NC_008133 Phascolarctos cinereus Koala Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Phascolarctidae; Phascolarctos FJ515782 Myrmecobius fasciatus Numbat Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Myrmecobiidae; Myrmecobius. NC_003321 Tachyglossus aculeatus Australian Echidna Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Tachyglossidae; Tachyglossus NC_002333 Danio rerio Zebrafish Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio NC_014764 Protopterus aethiopicus Marbled Lungfish Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Dipnoi; Lepidosireniformes; Protopteridae; Protopterus NC_009736 Egretta eulophotes Chinese Egret Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Ciconiiformes; Ardeidae; Egretta NC_006403 Hyla chinensis Chinese Toad Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea; Hylidae; Hylinae; Hylini; Hyla EU747728.2 Anolis carolinensis Green Anole Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Iguania; Iguanidae; Polychrotinae; Anolis NC_001626 Petromyzon marinus Sea Lamprey Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Petromyzon NC_004447 Ciona intestinalis Sea squirt Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona NC_001912 Branchiostoma lanceolatum Amphioxus Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma. NC_012616 Apostichopus japonicus Jap. Sea Cucumber Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Holothuroidea; Aspidochirotacea; Aspidochirotida; Stichopodidae; Apostichopus NC_002546 Fasciola hepatica Liver Fluke Eukaryota; Metazoa; Platyhelminthes; Trematoda; Digenea; Echinostomida; Echinostomata; Echinostomatoidea; Fasciolidae; Fasciola NC_010220 Biomphalaria tenagophila Snail Eukaryota; Metazoa; Mollusca; Gastropoda; Pulmonata; Basommatophora; Lymnaeoidea; Planorbidae; Biomphalaria NC_001566 Apis mellifera ligustica Honey Bee Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Apidae; Apis NC_014587 Hipparchia autonoe Russian Grayling Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Nymphalidae; Satyrinae; Satyrini; Satyrina; Hipparchia NC_008192 Flustrellidra hispida Bryozoan Eukaryota; Metazoa; Bryozoa; Gymnolaemata; Ctenostomata; Flustrellidridae; Flustrellidra