'tRNA-leu (CUN)' mutations and comparisons

The transfer RNA for leucine (CUN) is one of the transfer RNA's of 'mitochondrial DNA'.
It is located at Bases 12266 - 12336. (All numbering is from CRS.)

                 12266           12279                12296                      12317
Homo sapiens     ACTTTTA AA GGAT AACAGCT ATCC A TTGGT CTTAGGC  CCCAA AAAT  TTTGG TGCAACT CCAAA TAAAAGT A
Pan paniscus     actttta aa ggat aacagcc atcc g ttggt cttaggc  cccaa aaat  tttgg tgcaact ccaaa taaaagt a
Pan troglodytes  actttta aa ggat aacagtt atcc a ttggt cttaggc  cccaa aaat  tttgg tgcaact ccaaa taaaagt a
Gorilla gorilla  actttta aa ggat aacagct atcc a ttggt cttagga  cccaa aaat  tttgg tgcaact ccaaa taaaagt a
Pongo pygmaeus   actttta aa ggat aacagct atcc c ttggt cttagga  cccaa aaat  tttgg tgcaact ccaaa taaaagt a
Pongo abelii     actttta aa ggat aacagct atcc c ttggt cttagga  cccaa aaat  tttgg tgcaact ccaaa taaaagt a
Hylobates lar    actttta aa ggat aacagct atcc a ttggt cttagga  cccaa aaat  tttgg tgcaact ccaaa taaaagt a
Macaca Sylvanus  actttta aa ggat aacagct atcc a ttggc cttagga  gtcaa aaat  attgg tgcaact ccaaa taaaagt a
Macaca Mulatta   actttta aa ggat aacagct atcc a ttgac cttagga  gtcaa aaac  attgg tgcaact ccaaa taaaagt a
Papio hamadryas  actttta aa ggat aacagct atcc a ttggt cttagga  accaa aaac  attgg tgcaact ccaaa taaaagt a
Cercopithicus    actttta aa ggat aacagct atcc a ttggt tttaggga ccaaa aaat  attgg tgcaact ccaaa taaaagt a
Colobus Guereza  actttta aa ggat gacagcc atcc a ttggc cttagga  gccaa aaat  attgg tgcaact ccaaa taaaagt a
Trachypithecus   actttta aa ggat aacagat atcc g ttggt cttagga  accaa aaat  attgg tgcaact ccaaa taaaagt a
Cebus albifrons  gctttta aa ggat agtagtt atcc a ttggt cttagga  gccaa aaat  attgg tgcaact ccaaa taaaagc a
Nycticebus       actttta aa ggat gggagcc atcc g ttggt cttagga  gccaa aaa   attgg tgcaact ccaaa taaaagt a
Lemur Catta      actttta aa ggat agaagta atcc a ttggc cttagga  gccaa aaa   attgg tgcaact ccaaa taaaagt a
Tarsius          actttta aa ggat agaagta atcc a tcggc cttagga  gccga aaa   attgg tgcaact ccaaa taaaagt a
Tupaia           actttta aa ggat agaagta atcc g ttggt cttagga  accaa aaa   attgg tgcaact ccaaa taaaagt a
Cynocephalus     actttca aa ggat aaaagca atcc a ttggt cttagga  accaa aaaa  tttgg tgcaact ccaaa tgaaagt a

rhino
Black rhino (14) actttta aa ggat aacagtt atcc g ttggt cttagga  atcaa aaa   attgg tgcaact ccaaa taaaagt a
White rhino  (Y) actttta aa ggat ggtagtt atcc g ttggt cttagga  atcaa aaa   attgg tgcaact ccaaa taaaagt a
India rhino  (X) actttta aa ggat aggagtt atcc a ttggt cttagga  accaa aaa   attgg tgcaact ccaaa taaaagt a
Javan rhino (15) actttta aa ggat gggagct atcc g ttggt cttagga  accaa aaa   attgg tgcaact ccaaa taaaagt a
Woolly rhino(13) actttta aa ggat agaagtt atcc g ttggt cttagga  accaa aaa   attgg tgcaact ccaaa taaaagt a
Sumatran rh.(16) actttta aa ggat aggagtt atcc a ttggt cttagga  accaa aaa   attgg tgcaact ccaaa taaaagt a
Tapirus          actttta aa ggat aagagtt atcc a ttggt cttagga  accaa aaa   attgg tgcaact ccaaa taaaagt a
Hippopotamus     gctttta aa ggat ggtagct atcc a ttggt cttagga  accaa aaa   attgg tgcaact ccaaa taaaagc a
Equus            actttta aa ggat aggagct atcc g ttggt cttagga  accaa aaa   attgg tgcaact ccaaa taaaagt a

..................

Human NUMT sequences:-
NT_004487.18|Hs1_4644   chromosome  1 31882418-31882468
                                         ATCC G TTGGT CTTAGGA  ACCAA AAAC  ATTGA TGCAACT CCAAA TAAAAGT A  
NT_004836.17|Hs1_4993   chromosome  1   461001-460935
                 ACTTTTA AA GGAT TAGAGTC ATCC G TTGGT CTTAGGA  GCCAA AAGC  ATTGG TGCAACT CCAAA TAAA
NT_004836.17|Hs1_4993   chromosome  1  2872682-2872632
                                         ATCC G TTGGC CTTAGGA  ACCAA AAAC  ATTAG TGCAACT CCAAA TAAAAGT A
NT_032977.8|Hs1_33153   chromosome  1 64359530-64359460
                 ACTTTTA AA GCAT AGAAATA ATCC G CTGGA GTTAGGA  GCTAA AAAA  ATGAG TGTAACT CCAAA TAAAAGC A
NT_005403.16|Hs2_5560   chromosome  2 52287298-52287228
                 ACTTTTA GA GGAT GAGAGTT ATCC A TTGGT CTTAGGA  ACCAA AAAT  ATTGG TGCAACT CCAAA TAAAAGT A
NT_005403.16|Hs2_5560   chromosome  2 6377500-6377550
                                         ATCC T TTGGT CTTAGGA  ACCAA AAAC  ACTGA TGCAACT CCAAA TAAAAGT A
NT_022135.15|Hs2_22291  chromosome  2  9680641-9680687
                                              A TTGGT CTTAGGA  ACCAA AAAC  ATTGG TGCAACT CCAAA TAAAAGT A
NT_022135.15|Hs2_22291  chromosome  2 14146492-14146423
                 ACTTTTA AA GGAT TAGAGTC ATCC A CTGGT CTTAGGA  AGCAA AAAT  ATTGG TGCAACT CCAAA TAAAAGT
NT_022135.15|Hs2_22291  chromosome  2 19745719-19745789
                 ACTTTTA GA GGAT AAGAGCT ATCT G TTGGT CCTAGGA  ACCAA AAAT  ATTGG TGCAACT CCAAA TAAAAGT A
NT_022135.15|Hs2_22291  chromosome  2 20837659-20837592
                 ACTTTTA GA GGAT AAGAGCT ATCT G TTGGT CTTAGGA  ACCAA AAAT  ATTGG TGCAACT CCAAA TAAAA
NT_022135.15|Hs2_22291  chromosome  2 32562120-32562050
                 ACTTTCA AA GGAT AAGAGCT ATCC A TTGGT CACAGGA  ACGAA AAAT  ATTGG TGCAACT CCAAG TAAAAGT A
NT_022171.14|Hs2_22327  chromosome  2  5191873-5191831
                                                TTGGT CTTAGGA  ACCAA AAAC  ATTGG TGCAACT CCAAA TAAAA
NT_022184.14|Hs2_22340  chromosome  2 61858755-61858790
                                                           GA  ACCAA AAGC  ATTGG TGCAACT CCAAA TAAAAGT A
NT_005612.15|Hs3_5769   chromosome  3 13108206-13108140
                 ACTTTTA AA GGAT AGGAGTT ATCT A TTGAT CTTAGGA  ACCAA AAAC  ATTGG TTCAACT CCAAG TAAA
NT_006238.10|Hs4_6395   chromosome  4  6717854-6717828
                                                                       AT  TTTGG TGCAACT CCACA TAAAAGT A
NT_016354.17|Hs4_16510  chromosome  4 80924213-80924143
                 ACTTTTA AA GGAT TGGAGTT ATCC A TTGGT CTTAGGA  ACCAA AAAC  ATTGA TGTAACT CCAAA TAAAAGT A   
NT_016354.17|Hs4_16510  chromosome  4 87890824-87890754
                 ACTTTTA AA GGAT AACAGCC ATCC G TTGGT CTTAGGC  CCCAA AAAT  TTTGG TGCAACT CCAAA TAAAAGT A
NT_022778.15|Hs4_22934  chromosome  4  7134369-7134438
                 ACTTTTA AA GGAT AAGAGTT TTCT G TTGGT CTTAGGA  ACCAA AAAC  ATTGG TGCAACT CCAAA TAAAAGT
NT_034772.5|Hs5_34934   chromosome  5  1799573-1799503
                 ACTTTTA AA GGAT AACAGCC ATCC G TTGGT CTTAGGC  CCCAA AAAT  TTTGG TGCAACT CCAAA TAAAAGT A  
NT_034772.5|Hs5_34934   chromosome  5 36677233-36677163
                 ACTTTTA AA GGAT AACAGCC ATCC G TTGGT CTTAGGC  CCCAA AAAT  TTTGG TGCAACT CCAAA TAAAAGT A
NT_007422.13|Hs6_7579   chromosome  6  4269717-4269671
                                            C A TTGGT CTTAGGA  ACCAA AAAA  .TTGG TGCAACT CCAGA TAAAAGT A
NT_023629.12|Hs7_23785  chromosome  7   237143-237205
                          A GGAT AAGAGCT ATCC G TTGGT CTTAGAA  ACCAA ACAT  ATTGG TGCAACT CAAAA TAAAAGT A
NT_023629.12|Hs7_23785  chromosome  7   260442-260504
                          A GGAT AAGAGCT ATCC A TTGGT CTCAGGA  ACCAA AAAT  ATTGG TGCAACT CCAAA TACAAGT A
NT_007995.14|Hs8_8152   chromosome  8  2984247-2984181
                    TTTA AA GGAT AAGAGTT TTCC A TTGGT CTTAGGA  ACCAA AA.T  ATTGG TGCAACT CCAAA TAAAAGT A
NT_008183.18|Hs8_8340   chromosome  8 20351056-20350986
                 ACTTTTA AA GGAT GAGAGTC ATCC G TTGGT CTTAAGA  ACCAA AAAC  ACTGG TGCAACT CCAAA TAAAAGT A
NT_008413.17|Hs9_8570   chromosome  9  5099422-5099492
                 ACTTTTA AA GGAT TGGAGTC ATCC G TTGGC CTTAGGA  ACCAA AAAC   ATTGG TGCAACT CCAAA GAAAAGT A
NT_008705.15|Hs10_8862  chromosome 10 18698808-18698738
                 ACTTTTA AA GTAT AAGAGCG ACCC A TTGGT CTTAGGA  ACCAA AAAT  ATTGG TGCAACT CCAAA TAAAAGT A
NT_033927.7|Hs11_34082  chromosome 11 11487827-11487897
                 ACTTTTA AA GAAT TAGAGGT ATCC A TTGGT CTTAGGA  AGCAA AAAC  ATTGG TGTAACT CCAAA TAAAAGT A
NT_009755.18|Hs12_9912  chromosome 12  8210155-8210085
                 ACTTTTA AA GGAT TAGAGTC ATCT G TTGAT CTTAGGA  ACCAA AAAC  TTTGG TGCAACT CCAAA TAAAAGT A
NT_024524.13|Hs13_24680 chromosome 13 50263577-50263509
                 ACTTTTA TA GAAC AGAAGAA AACC . TTGGC CTTAGGA  GCCAA AAA.   ATTGG TGCAATT CCAAA TATCAGT A
NT_024524.13|Hs13_24680 chromosome 13 66075793-66075861
                   TTTTA AA GGAT AAGACTT ATCT G TTGGT CTTAGGA  ACCCA AAAC  ATTTG TGCAACT CCAAA TAAAAGT A
NT_026437.11|Hs14_26604 chromosome 14 65639833-65639886
                 ACTTTTA AA GGAT TAGAGTT ATCC A TTGGT CTTAGGA  ACCAA AAAC  ATTGG TGC
NT_010194.16|Hs15_10351 chromosome 15 11217390-11217320
                 ACTTTTA GA GGAT GAGAGTT ATCC A TTGGT CTTAGGA  ACCAA AAAT  ATTTG TGCAATT CCAAA TAAAAGT A
NT_010393.15|Hs16_10550 chromosome 16  2128501-2128431
                 ACTTTTA AA GGAT AAGAGTT ATCC A TTGGT CTCAGGA  ACCAA AAAC  ATCGG TGCAACT CCAAA TAAAAGT A
NT_010393.15|Hs16_10550 chromosome 16 12046756-12046686
                 ACTTTTA AA GGAT AAGAGTC ATCA G TTGGT CTTAGGA  ACCAA AAAC  ATTGT TGCAACT CCAAA TAAAAGT A
NT_010498.15|Hs16_10655 chromosome 16 23006861-23006911
                                         ATCC A CTGGA CTTAGGA  ACCAA AAAC  ATTGG TGCAACT CCAAA TAAAAGT A
NT_010783.14|Hs17_10940 chromosome 17 11633812-11633743
                 ACTTTTA AA GGAG AGAAGTA ATCC G TTGTT CTTAGGA  GCCAA AAC.   ATTGG CACAACT CCAAA TAAAAGT A  
NT_011109.15|Hs19_11266 chromosome 19 10330988-10330934
                 ACTTTTA AA GGTT AGATGCA ATCT G TTGGC CTTAGGA  GCCAA AAA.   GTTGT TGCAA
NT_011109.15|Hs19_11266 chromosome 19 10331814-10331882
                 ACTTTTA AA GGTT AGAAGTA ATCT G TTGGC CTTAGGA  GCCAA AAA.   .TTGG TGCAACT TCAAA TAAAATT A 
NT_011109.15|Hs19_11266 chromosome 19 29701908-29701978
                 ACTTTTA AA GGAT TAGAGTT AACC A TTGGT CTAAGGA  ACCAA AAAC  ACTGG TGCAACT CCAAA TAAAAGT A  
NT_011515.11|Hs21_11672 chromosome 21  1212386-1212317
                 ACTTTTA AA GGAT AGAAGTA ATCC A TCGGT CTTAGGA  ATCAA AAAA  .TTGG TGCAACT CCAAA TAAAAGT A
NT_011651.16|HsX_11808  chromosome  X 25354207-25354276
                 ACTTTTA AA GGGT AGAAGTA ATCT G TTGGC CTTAGGA  GCCAA AAA.   ATCGA TACAACT CCAAA TAAAAGT A  
NT_011669.16|HsX_11826  chromosome  X  7665324-7665255
                  CTTTTA AA GGAT AGAAGCT ATTC A TTGGC CTTAGGA  GCCAA AAAG  ATTGG TGCAACT CCAAA TAAAAGT A
NT_011757.15|HsX_11914  chromosome  X  1859449-1859391
                               T AGAAGTA ATTC A TTGGC CTTAGGA  GTCAA AGGT   ATTGG TGCAACT GCAAA TAAAAGT A
              
CRS              ACTTTTA AA GGAT AACAGCT ATCC A TTGGT CTTAGGC  CCCAA AAAT   TTTGG TGCAACT CCAAA TAAAAGT A

................
Pan troglodytes  actttta aa ggat aacagtt atcc a ttggt cttaggc  cccaa aaat   tttgg tgcaact ccaaa taaaagt a

NW_001228910.1|Ptr1_WGA119_2:c2050285-2050215 Pan troglodytes chromosome 1
                 ACTTTTA AA GCAT AGAAATA ATCC G CTGGA GTTAGGA  GCTAA AAAA   ATGAG TGTAACT CCAAA TAAAAGC A
NW_001234061.1 Pan troglodytes NUMT chromosome  4
                 ACTTTTA AA GGAT AAGAGTT ATCT G TTGGT CTTAGGA  ACCAA AAAC   ATTGG TGCAACT CCAAA TAAAAGT A
NW_001240439.1|Ptr9_WGA10996_2:4433669-4433739 Pan troglodytes chromosome 9
                 ACTTTTA AA GGAT AGGAGTC ATCC G TTGGT CTTAGGA  ACCAA AAAC   ATAGG TGCAACT CCAAA TAAAAGT A


................

Macaca Mulatta   actttta aa ggat aacagct atcc a ttgac cttagga  gtcaa aaac   attgg tgcaact ccaaa taaaagt a

NW_001108738.1|Mmu1_WGA111_1:c682935-682864 Macaca mulatta chromosome 1
                 ATTTTTA AA GCAT AGAAGTA  GTGC A TTGGT GTTAGGA  GCTAA AAAA AATGAG TGTAACT CCAAA TAAAAGC A
NW_001218170.1 Macaca NUMT chromosome  X
                 ACTTTTA AA GGAT AGAAGTA  ATCT G TTGGC CTTAGGA  GCCAA AAAC  .TTGA TACAACT CCAAA TAAAAGT A
NW_001098157.1 Macaca NUMT chromosome 12
                 ACTTTTA AA GGAT AAGAGCT  ATCC A TTGGT CATAGAA  ACCAA AAAT  ATTGG TGCAACT CGAAG TAAAAGT A

......................

Bos taurus       ACTTTTA AA GGAT AGTAGTTT ATCC G TTGGT CTTAGGA ACCAA AAAA   .TTGG TGCAACT CCAAA TAAAAGT A

NW_001492833.1|Bt10_WGA1341_3:c53812-53742  Bos taurus chromosome 10
                 ACTTTTA AA GGAT GATAGTT  ATCC A TTGGT CTTAGGA  AACAA AAAA  ACCGG TGCAACT CCAAA TAAAAGT A
NW_001492942.1|Bt11_WGA1450_3:1069-1138     Bos taurus chromosome 11
                 ACTTTTA AA GGAC AGTAGTT  ATCC A TTGGT CTTAGGA  ACCAA AAAA  .TTGG TGCAACT CCAAA TAAAAGT G
NW_001492959.1|Bt11_WGA1467_3:875798-875867 Bos taurus chromosome 11
                 ACTTTTA AA GGAT GGTAGTT  ATCC G TTGGT CTTAGGA  ACCAA AAAA  .TCGG TGCAACT CCAAA TAAAAGT A
NW_001493530.1|Bt17_WGA2038_3:34720-34769   Bos taurus chromosome 17
                                          ATCC A TCAAT CTTAGGA  ACCAA AAAA  .CTGG TGCAACT CCAAA TAAAAGT A
......................

Human Mutations found in published genealogical sequences:-
CRS              ACTTTTA AA GGAT AACAGCT  ATCC A TTGGT CTTAGGC  CCCAA AAAT  TTTGG TGCAACT CCAAA TAAAAGT A
                 12266           12279                12296                      12317

C12267G
T12268C
EF495218(Aust)   AGCTTTA AA GGAT AACAGCT ATCC A TTGGT CTTAGGC  CCCAA AAAT  TTTGG TGCAACT CCAAA TAAAAGT A
G12276A
AY665667         
A12279G
AY922299(India)  ACTTTTA AA GGAT GACAGCT ATCC A TTGGT CTTAGGC  CCCAA AAAT  TTTGG TGCAACT CCAAA TAAAAGT A
A12280G
DQ112956(Africa) ACTTTTA AA GGAT AGCAGCT ATCC A TTGGT CTTAGGC  CCCAA AAAT  TTTGG TGCAACT CCAAA TAAAAGT A
T12285C
AY714028(India)  ACTTTTA AA GGAT AACAGCC ATCC A TTGGT CTTAGGC  CCCAA AAAT  TTTGG TGCAACT CCAAA TAAAAGT A    
T12297C
AY882388(Adygei) ACTTTTA AA GGAT AACAGCT ATCC A TTGGT CCTAGGC  CCCAA GAAT  TTTGG TGCAACT CCAAA TAAAAGT A
G12300T
EF184640(Tanz.)  ACTTTTA AA GGAT AACAGCT ATCC A TTGGT CTTATGC  CCCAA AAAT  TTTGG TGCAACT CCAAA TAAAAGT A
C12303T         
DQ112921(Africa) ACTTTTA AA GGAT AACAGCT ATCC A TTGGT CTTAGGC  TCCAA AAAT  TTTGG TGCAACT CCAAA TAAAAGT A
A12307G
JQ706026
A12308G
DQ156209(Eur.)   ACTTTTA AA GGAT AACAGCT ATCC A TTGGT CTTAGGC  CCCAA GAAT  TTTGG TGCAACT CCAAA TAAAAGT A
T12311C
AY495232(Eur.)   ACTTTTA AA GGAT AACAGCT ATCC A TTGGT CTTAGGC  CCCAA AAAC  TTTGG TGCAACT CCAAA TAAAAGT A  
12311.1A 
EF657406(Eur.)   ACTTTTA AA GGAT AACAGCT ATCC A TTGGT CTTAGGC  CCCAA AAATA TTTGG TGCAACT CCAAA TAAAAGT A
T12317G
EF657346(Asia)   ACTTTTA AA GGAT AACAGCT ATCC A TTGGT CTTAGGC  CCCAA AAAT  TTTGG GGCAACT CCAAA TAAAAGT A     
A12321G
AY950294(Andaman)ACTTTTA AA GGAT AACAGCT ATCC A TTGGT CTTAGGC  CCCAA AAAT  TTTGG TGCAGCT CCAAA TAAAAGT A     
A12331G
EF657364(Eur.)   ACTTTTA AA GGAT AACAGCT ATCC A TTGGT CTTAGGC  CCCAA GAAT  TTTGG TGCAACT CCAAA TAGAAGT A



Haplogroups:

C12267G  -  Q2
T12268C  -  Q2
G12276A  -  J1c
A12279G  -  H1 M
A12280G  -  A1 D3 E L2 L3 L7
T12285C  -  L3e U5 - present throughout R6
T12297C  -  D5 U4b
G12300T  -  L3
C12303T  -  L0d L5
A12306G  -  J1c3
A12307G  -  3 - U2d
A12308G  -  present throughout haplogroups K & U
T12311C  -  J1b L3 M34  - present throughout G2
12311.1A -  H1
T12317G  -  D1
A12321G  -  M31
A12331G  -  U5




2009 & 2016