'mtDNA'

Haplogroup R5.

Click link to see tree diagram for this haplogroup.
Haplogroup R5 tree
Haplogroup R5 is found in the Indian sub-continent and is possibly
closely related to Haplogroup F.

The details of sequences are:


 1. Palanichamy     A8.JS       AY713983(India)
 2. Palanichamy     A9.JS       AY713984(India)
 3. Palanichamy     A10.JS      AY713985(India)
 4. Palanichamy     A14.JS      AY713989(India)
 5. Palanichamy     A16.JS      AY713991(India)
 6. Palanichamy     A18.JS      AY713993(India)
 7. Palanichamy     A21.JS      AY713996(India)
 8. Palanichamy     A22.JS      AY713997(India)    
 9. Palanichamy     A23.JS      AY713998(India)
10. Palanichamy     A25.JS      AY714000(India)
11. Palanichamy     A27.JS      AY714002(India)

12. Behar2008       A49.JS      EF556196

13. Chaubey                     FJ004806    R5a1a
14. Chaubey                     FJ004812    R5a2b3
15. Chaubey                     FJ004814    R5a2b
16. Chaubey                     FJ004815    R5a2b
17. Chaubey                     FJ004822    R5a1a
18. Chaubey                     FJ004828    R5a2b4
19. Chaubey                     FJ004829.2  R5a2b2
20. Chaubey                     FJ004833    R5a2b3
21. Chaubey                     FJ004834    R5a2b4
22. Chaubey                     FJ004837    R5a1


All sequences have these differences from the CRS:

- for the main stem leading from H:

A73G     A263G    A750G    A1438G   A2706G   A4769G
C7028T   A8860G   G11719A  C14766T  A15326G

- and for Haplogroup R5:

T8594C   A10754G  G14544A  T16304C  A16524G


and 
- excluding variations at 309 & 315

- variable 16519 results

the mutation lists are:


 1. Palanichamy    A8.JS      AY713983(India)
A93G     A200G    C522.    A523.    A2833G   T8987C   T9708C   T10084C  T14088C
C16266T

 2. Palanichamy    A9.JS      AY713984(India)
A93G     A200G    C522.    A523.    A2833G   T8987C   T9708C   T10084C  T14088C
C16266T

 3. Palanichamy    A10.JS     AY713985(India)
T152C    C522.    A523.    C979T    T4511C   A11293G  T13635C  G14040A  C15385T
T15479C  T16311C  T16356C

 4. Palanichamy    A14.JS    AY713989(India)
T152C    C522.    A523.    597.T    A6629G   A11293G  T13635C  G14040A  C14990T
C15385T  C16266T  T16325C  T16356C

 5. Palanichamy    A16.JS    AY713991(India)
T152C    C522.    A523.    597.T    A6629G   A11293G  T13635C  G14040A  C14990T
C15385T  C16266T  A16309G  T16325C  T16356C  A16524G 

 6. Palanichamy    A18.JS     AY713993(India)
T152C    C522.    A523.    T1095C   C3894T   A11293G  T13635C  G13708A  G14040A
C15385T  T16189C  C16256T  C16266T  T16271C  T16356C

 7. Palanichamy    A21.JS     AY713996(India)
T152C    C522.    A523.    G3531A   A6485G   C7400T   A11293G  A11866G  T13635C
G14040A  C15385T  C16248T  T16311C  T16356C

 8. Palanichamy    A22.JS    AY713997(India)
T152C    C522.    A523.    597.T    A6629G   T7686C   A11293G  T13635C  G14040A
C14990T  C15385T  C16266T  A16309G  T16325C  T16356C

 9. Palanichamy    A23.JS    AY713998(India)
C64T     C5875T   A8188G   8276.C   A8446G   C8622T   C9296T   A9503G   A12507G
G13958C  G16526A

10. Palanichamy    A25.JS    AY714000(India)
T152C    C522.    A523.    597.T    A6629G   A11293G  T13635C  G14040A  C14266T
C14990T  C15385T  C16147T  C16266T  A16309G  T16325C  T16356C

11. Palanichamy    A27.JS   AY714002(India)
T152C    C522.    A523.    597.T    A5102G   A6353G   T9083C   A11293G  T13635C
G14040A  C14766T  C14990T  C15385T  T16124C  A16309G  T16325C  T16356C  T16362C

12. Behar2008      A49.JS   EF556196
A93G     A200G    C522.    A523.    A2833G   G5147A   T8987C   T9708C   T10084C   
T14088C  C16266T  T16311C 

13. Chaubey                 FJ004806  R5a1a
A73G A93G T152C A200G A263G C522- A523- A750G A1438G A2706G A2833G A4769G C7028T 
T8594C A8860G T8987C T9708C T10084C A10754G G11719A G14544A C14766T A15326G
C16266T T16304C T16519C A16524G 

14. Chaubey                 FJ004812 R5a2b3
A73G A263G C522- A523- 597.1T A750G A1438G A2706G A3221G C4116T A4769G C7028T 
T8594C A8860G A10754G A11293G C11409T G11719A T13635C G14040A G14544A C14766T 
C14990T A15326G C15385T C16266T T16304C A16309G T16325C T16356C T16519C A16524G 

15. Chaubey                 FJ004814 R5a2b
A73G T152C A263G A523- 597.1T A750G A1438G A2706G A4769G C7028T T8594C A8860G 
A10754G A11293G C11555T G11719A T13635C G14040A G14544A C14766T C14990T A15326G 
C15385T T16093C C16266T T16304C A16309G T16325C T16356C T16519C A16524G 

16. Chaubey                 FJ004815 R5a2b
A73G T152C A263G C522- A523- 597.1T A750G A1438G A2706G A4769G C7028T T8594C 
A8860G A10754G A11293G G11719A T13635C G14040A G14544A C14766T C14990T 
A15326G C15385T G15497A C16266T T16304C A16309G T16325C T16356C T16519C A16524G 

17. Chaubey                 FJ004822 R5a1a
A73G A93G A200G A263G C522- A523- A750G A1438G A2706G A2833G A4769G C7028T T8594C 
A8860G T8987C T9708C T10084C A10754G G11719A G14544A C14766T A15326G C16266T 
T16304C T16519C A16524G

18. Chaubey                 FJ004828 R5a2b4
A73G T152C A263G C522- A523- 597.1T A750G A1438G G1462A G1719A A2706G A4769G C7028T 
T8594C A8860G A10754G A11293G G11719A T13635C A13827G G14040A G14544A C14766T 
C14990T A15326G C15385T C16266T T16304C A16309G T16325C T16356C T16519C A16524G 

19. Chaubey                 FJ004829.2 R5a2b2
A73G T152C A263G C522- A523- 597.1T A750G A1438G A2706G A4769G G6260A G6899A C7028T 
T8324C T8594C A8860G A10754G A11293G G11719A T13635C G14040A G14544A C14766T C14990T 
A15326G C15385T C15749T T16304C A16309G A16322G T16325C A16335G T16356C T16519C 

20. Chaubey                 FJ004833  R5a2b3
A73G T152C A263G C522- A523- 597.1T A750G A1438G A2706G A4769G C7028T T8594C A8860G 
A10754G A11293G C11409T G11719A T13635C G14040A G14544A C14766T C14990T G15106A A15326G 
C15385T C16266T T16304C A16309G T16325C T16356C T16519C A16524G 

21. Chaubey                 FJ004834 R5a2b4
A73G T152C A263G C522- A523- 597.1T A750G A1438G A2706G A4769G C7028T T8594C A8860G 
A10754G A11293G G11719A T13635C A13827G G14040A G14544A C14766T C14990T A15326G C15385T 
C16266T T16304C A16309G T16325C T16356C T16519C A16524G 

22. Chaubey                 FJ004837 R5a1
A73G A93G A200G A263G C522- A523- A750G T850C A1438G G1709A A2706G A2833G A4769G G4853A 
C7028T C8120T T8279C T8594C A8860G A10754G G11377A G11719A G14544A C14766T A15326G 
T16172C C16266T T16304C T16519C A16524G 

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2009