'mtDNA'

Haplogroup M39.

Click link to see tree diagram for this haplogroup.
Haplogroup M39 tree

The groups around the M* are mainly East Asian groups.

There are separate pages for M1, M6. M7, M8, M9, M10, M11, M12, M34 & M35.

The sequences for the M39 haplogroup are:

 1. Sun           A10.JS          AY922262
 2. Sun           A17.JS          AY922269
 3. Sun           A23.JS          AY922275
 4. Sun           A36.JS          AY922288
 5. Sun           A41.JS          AY922293

 6. Behar2008     A4.JS           EF556151

 7. Rao2009-7     A73.JS          FJ383696   M39 22-SEP-2009
 8. Rao2009-7     A74.JS          FJ383697   M39 22-SEP-2009
 9. Rao2009-7     A75.JS          FJ383698   M39 22-SEP-2009
10. Rao2009-8     A1.JS           FJ383699   M39 22-SEP-2009
11. Rao2009-8     A2.JS           FJ383700   M39 22-SEP-2009
12. Rao2009-8     A3.JS           FJ383701   M39 22-SEP-2009
13. Rao2009-8     A4.JS           FJ383702   M39 22-SEP-2009
14. Rao2009-8     A5.JS           FJ383703   M39 22-SEP-2009
15. Rao2009-8     A6.JS           FJ383704   M39 22-SEP-2009
16. Rao2009-8     A7.JS           FJ383705   M39 22-SEP-2009
17. Rao2009-8     A8.JS           FJ383706   M39 22-SEP-2009
18. Rao2009-8     A9.JS           FJ383707   M39 22-SEP-2009
19. Rao2009-8     A10.JS          FJ383708   M39 22-SEP-2009
20. Rao2009-8     A11.JS          FJ383709   M39 22-SEP-2009
21. Rao2009-8     A12.JS          FJ383710   M39 22-SEP-2009
22. Rao2009-8     A13.JS          FJ383711   M39 22-SEP-2009
23. Rao2009-8     A14.JS          FJ383712   M39 22-SEP-2009
24. Rao2009-8     A15.JS          FJ383713   M39 22-SEP-2009
25. Rao2009-8     A16.JS          FJ383714   M39 22-SEP-2009
26. Rao2009-8     A17.JS          FJ383715   M39 22-SEP-2009

 
The sequences has these differences from the CRS:

- for the main stem leading from H:

A73G     A263G    A750G    A1438G   A2706G   A4769G   C7028T   A8701G
A8860G   T9540C   A10398G  T10873C  G11719A  C12705T  C14766T  G15301A
A15326G  C16223T

- and for the M* branch:

T489C    A1811G  C10400T  T14783C  G15043A

- and for  M39

55.1T    65.1T   A8679G   C15938T

- and ignoring changes at 309 & 315.


the mutation list is:

 1. Sun           A10.JS          AY922262 (1811)
55.1T    T59-     T60-     65.1T    65.2T    G71-
A153G    C463T    T485C    A9374G   C14664T

 2. Sun           A17.JS          AY922269
55.1T    T59-     T60-     65.1T    65.2G    G71-
C182T    A10188G  C10619T  C15589A  C16270T  T16325C

 3. Sun           A23.JS          AY922275
55.1T    T59-     T60-     65.1T    65.2T    G71-     
T152C    A153G    C463T    T485C    A9374G   C14446T  C15499A  A16091G 
T16304C  T16519C

 4. Sun           A36.JS          AY922288
55.1T    55.2T    A56T     T59-     T60-     65.1T    65.2T    G71-
T146C    T3398C   T3540A   T4384C   G5252A   C5646T   C6410T   A8601G   C9719T

 5. Sun           A41.JS          AY922293
55.1T    T59-     T60-     65.1T    65.2T    G71-     
C182T    C960T    A10188G  C10619T  G15106A  G15497A  C15589A  C16270T  T16325C  A16482G 

 6. Behar2008     A4.JS           EF556151
55.1T    T59-     T60-     65.1T    65.2G    G71-
T152C    G207A    C1120T   T4928C   G5773A   A8704G   A9284G   C9383T   G9738A   G15043A 
A16166G  T16311C  T16519C 

 7. Rao2009-7     A73.JS          FJ383696   M39 22-SEP-2009
55.1T    T59-     T60-     65.1T    65.2T    G71- 
A153G    T195C    C463T    T485C    G3531A   T6620C  G8152A    A9374G  

 8. Rao2009-7     A74.JS          FJ383697   M39a 22-SEP-2009
55.1T    T59-     T60-     65.1T    65.2T    G71-   
A153G    T195C    C463T    T485C    G3531A   T6620C  G8152A    A9374G  

 9. Rao2009-7     A75.JS          FJ383698   M39a 22-SEP-2009
55.1T    T59-     T60-     65.1T    65.2T    G71-  
A153G    T195C    C463T    T485C    G3531A   G8152A   A9374G   T16271C 

10. Rao2009-8   A1.JS             FJ383699  M39 22-SEP-2009
55.1T    T59-     T60-     65.1T    65.2T    G71- 
A153G    T195C    C463T    T485C    G3531A   T6620C   G8152A   A9374G  

11  Rao2009-8      A2.JS          FJ383700  M39 22-SEP-2009
55.1T    T59-     T60-     65.1T    65.2T    G71- 
A153G    T195C    C463T    T485C    G3531A   G8152A   A9374G   T16271C 

12  Rao2009-8    A3.JS.           FJ383701 M39a 22-SEP-2009
55.1T    T59-     T60-     65.1T    65.2T    G71- 
A153G    C463T    T485C    G3531A   A9374G   C14446T  T16304C 

13. Rao2009-8     A4.JS           FJ383702 M39a 22-SEP-2009
55.1T    T59-     T60-     65.1T    65.2T    G71- 
A153G    A234G    T485C    G5460A   A13105G  C15508T  G16255A 

14. Rao2009-8   A5.JS            FJ383703  M39a 22-SEP-2009
55.1T    T59-     T60-     65.1T    65.2T    G71- 
A234G    C463T    T485C    T3552C   G4853A   G8152A   A9374G   T16362C 

15. Rao2009-8 A6.JS              FJ383704  M39a 22-SEP-2009
55.1T    T59-     T60-     65.1T    65.2T    G71- 
A153G    C463T    T485C    G3531A   A9374G   C14446T  T16304C 

16. Rao2009-8   A7.JS            FJ383705  M39a 22-SEP-2009 (16223)
55.1T    T59-     T60-     65.1T    65.2G    G71- 
G207A    C1120T   A4093G   T4928C   G5773A   A8704G   C10654T  C16111T  C16353T 

17. Rao2009-8   A8.JS            FJ383706  M39a 22-SEP-2009 (16223)
55.1T    T59-     T60-     65.1T    65.2G    G71- 
G207A    C1120T   T4928C   G5773A   A8704G   C10654T  A15924G  C16111T  C16353T 

18. Rao2009-8   A9.JS            FJ383707  M39a 22-SEP-2009 (1811)
55.1T    T59-     T60-     65.1T    65.2T    G71- 
A153G    T485C    G1888A   T2392C   A11172G  C15508T  A15924G  T16172C  

19. Rao2009-8   A10.JS           FJ383708  M39a 22-SEP-2009
55.1T    T59-     T60-     65.1T    65.2T    G71- 
A153G    T485C    T1420C   G7337A   A11172G  C15508T A15924G  T16172C  

20. Rao2009-8   A11.JS           FJ383709  M39a 22-SEP-2009 (1811)
55.1T    T59-     T60-     65.1T    65.2T    G71- 
A153G    T485C    C4380T   8289.1C  8289.2C  8289.3C  8289.4C  8289.5C  8289.6T 
8289.7C  8289.8T  8289.9A  A11172G  C15508T  A15924G  T16172C  

21. Rao2009-8     A12.JS          FJ383710  M39 22-SEP-2009
55.1T    T59-     T60-     65.1T    65.2T    G71- 
G207A    C1120T   T4928C   G5773A   A8704G   C9383T  

22. Rao2009-8     A13.JS          FJ383711  M39 22-SEP-2009
55.1T    T59-     T60-     65.1T    65.2T    G71- 
T146C    A153G    A234G    C463T    T485C    A9374G 

23. Rao2009-8     A14.JS          FJ383712  M39 22-SEP-2009 (1811 16223)
55.1T    T59-     T60-     65.1T    65.2G    G71- 
T204C    G207A    C1120T   T4928C   G5773A   A8704G   C10654T  C16111T C16353T 

24. Rao2009-8     A15.JS          FJ383713  M39 22-SEP-2009
55.1T    T59-     T60-     65.1T    65.2T    G71- 
A153G    T485C    T1420C   A11172G  C15508T  A15924G  T16172C 

25. ARao2009-8    A16.JS          FJ383714  M39 22-SEP-2009 (1811)
55.1T    T59-     T60-     65.1T    65.2G    G71- 
G207A    C1120T   A1453G   T4928C   G5773A   A8704G   C8847A   A10694C  C11476T  C16278T 

26. Rao2009-8     A17.JS         FJ383715   M39 22-SEP-2009
55.1T    T59-     T60-     65.1T    65.2G    G71- 
T195C    C198T    C1120T   T4928C   G5773A   A8704G   C9383T   A16166G  T16311C 

..........

Back




2009