'mtDNA'

Haplogroup C1.

Click link to see tree diagrams for this haplogroup.
Haplogroups C1a & C1b tree
Haplogroups C1c & C1d tree

Haplogroup C1 is an Eastern Asian and American group

Here are the examples of sequences for this haplogroup:
 
 1. Ingman        A50.JS       AF347012(Warao)           C1d
 2. Ingman        A51.JS       AF347013(Warao)           C1d 

 3. Maca-Meyer    A29.JS       AF382009.2(Canary)        C1b

 4. Mishmar       A15.JS       AY195759.2(N American)    C1b

 5. Starik.       A13.JS       AY519496.2(Ulchi)         C1a

 6. Tanaka        (11)A39.JS   TCsq0052(Japanese)        C1a

 7. Parsons                    DQ282447(Hispanic)        C1b
 8. Parsons                    DQ282448(Hispanic)        C1b
 9. Parsons                    DQ282449(Hispanic)        C1b
10. Parsons                    DQ282450(Hispanic)        C1b
11. Parsons                    DQ282451(Hispanic)        C1b
12. Parsons                    DQ282452(Hispanic)        C1b
13. Parsons                    DQ282453(Hispanic)        C1b
14. Parsons                    DQ282454(Hispanic)        C1b
15. Parsons                    DQ282455(Hispanic)        C1b
16. Parsons                    DQ282456(Hispanic)        C1b
17. Parsons                    DQ282457(Hispanic)        C1b
18. Parsons                    DQ282458.2(Hispanic)      C1b
19. Parsons                    DQ282459(Hispanic)        C1c
20. Parsons                    DQ282460(Hispanic)        C1c
21. Parsons                    DQ282461(Hispanic)        C1b
22. Parsons                    DQ282462(Hispanic)        C1c
23. Parsons                    DQ282463(Hispanic)        C1c
24. Parsons                    DQ282464(Hispanic)        C1b
25. Parsons                    DQ282465(Hispanic)        C1c
26. Parsons                    DQ282466(Hispanic)        C1c
27. Parsons                    DQ282467(Hispanic)        C1c
28. Parsons                    DQ282468(Hispanic)        C1c
29. Parsons                    DQ282469(Hispanic)        C1b
30. Parsons                    DQ282470(Hispanic)        C1c
31. Parsons                    DQ282471(Hispanic)        C1c
32. Parsons                    DQ282472(Hispanic)        C1d
33. Parsons                    DQ282473(Hispanic)        C1d
34. Parsons                    DQ282474(Hispanic)        C1d
35. Parsons                    DQ282475(Hispanic)        C1b
36. Parsons                    DQ282476(Hispanic)        C1b

37. Derenko                    EF153779                  C1a

38. Ingman_gyll                EU007858(Nanaitci)        C1a

39. Tamm                       EU095527(Arsario)         C1c
40. Tamm                       EU095537(Coreguaje)       C1d
41. Tamm                       EU095544(Kogui)           C1c
42. Tamm                       EU095549(Wayuu)           C1b

43. FTDNA                      EU327891                  C1c
44. FTDNA                      EU327973                  C1c

45. Kivisild                   DQ112789.2(America)       C1d    CODING AREA ONLY
46. Kivisild                   DQ112846.2(America)       C1b    CODING AREA ONLY
47. Kivisild                   DQ112888.2(America)       C1c    CODING AREA ONLY

48. Herrnstadt                 EF657282 mtDNA145(Asia)   C1b    CODING AREA ONLY
49. Herrnstadt                 EF657314 mtDNA174(Asia)   C*     CODING AREA ONLY
50. Herrnstadt                 EF657317 mtDNA177(Asia)   C1c    CODING AREA ONLY
51. Herrnstadt                 EF657324 mtDNA183(Asia)   C1c    CODING AREA ONLY
52. Hernstadt                  EF657329 mtDNA188(Asia)   C1c    CODING AREA ONLY
53. Herrnstadt                 EF657355 mtDNA210(Asia)   C1c    CODING AREA ONLY
54. Herrnstadt                 EF657504 mtDNA345(Asia)   C1d    CODING AREA ONLY
55. Herrnstadt                 EF657547 mtDNA384(Asia)   C1c    CODING AREA ONLY
56. Herrnstadt                 EF657584 mtDNA417(Asia)   C1b    CODING AREA ONLY
57. Herrnstadt                 EF657588 mtDNA420(Asia)   C1c    CODING AREA ONLY

58. Fagundes         A29.JS    EU095222(Waiwai)          C1
59. Fagundes         A30.JS    EU095223(Zoro)            C1b
60. Fagundes         A31.JS    EU095224(Zoro)            C1b
61. Fagundes         A32.JS    EU095225(Quechua)         C1b
62. Fagundes         A33.JS    EU095226(Quechua)         C1b
63. Fagundes         A34.JS    EU095227(Arara)           C1b
64. Fagundes         A35.JS    EU095228(Poturujara)      C1b
65. Fagundes         A36.JS    EU095229(Yanomama)        C1b
66. Fagundes         A37.JS    EU095230(Yanomama)        C1b
67. Fagundes         A38.JS    EU095231(Yanomama)        C1b

68. Achilli                    EU431085(USA)             C1b4        01-AUG-2008
69. Achilli                    EU431086(Canada)          C1c
70. Achilli                    EU431087(USA)             C1c

71. Hartmann                   EU597533(Pima, Mexico)    C1          06-APR-2008
72. Hartmann                   EU597545(Pima, Mexico)    C1b         06-APR-2008
73. Hartmann                   EU597557(Pima, Mexico)    C1b         06-APR-2008

74. FTDNA                      EU617323                  C1c         13-APR-2008
75. FTDNA                      GQ397486(Puerto Rico)     C1b2a       09-AUG-2009

The sequences has these differences from the CRS:

- for the main stem leading from H:

73       263      750      1438     2706     4769     7028     8701
8860     9540     10398    10873    11719    12705    14766    15301
15326    16223

- and for the M* branch:

489      10400    14783    15043

- and for haplogroups C, Z, & M8:

4715     7196     8584     15487     16298

- and for C:

249-     3552     9545     11914     13263    14318    16327

- and for C1
C522-    C523-    A290-    A291-     T16325C 

Allowing for 

- the variable 16519,
- and changes at 309-315

the mutation list is:

 1. Ingman        A50.JS     AF347012(Warao)          C1d
C194T    A200G    G3010A   A6770G   G7697A   G9591A   A16051G  T16189C  16193.C 
G16438A 

 2. Ingman        A51.JS     AF347013(Warao)          C1d
C194T    A200G    G3010A   G7697A   G9591A   A16051G  T16189C  16193.C  16193.C 
G16438A 

 3. Maca-Meyer    A29.JS     AF382009.2(Canary)       C1b
A493G    G7013A   C9557T   G12454A  T12574C 

 4. Mishmar       A15.JS     AY195759.2(N American)   C1b
A493G    T5493C   G6962A   T8555C   A10151G  T11147C 
 
 5. Starik.       A13.JS     AY519496.2(Ulchi)  (C522- A523-)  C1a
T3826C   G7598A   T16356C 

 6. Tanaka        (11)A39.JS  AP008311 TCsq0052(Japanese)      C1a
A93G     T2887C   T3826C   G7598A   C9099A   T9750C   G13590A  G15773A  T16093C 
C16192T  T16356C 

 7. Parsons                   DQ282447(Hispanic)      C1b
A493G    C4242T   G7013A   C9557T   G12454A 

 8. Parsons                   DQ282448(Hispanic)      C1b
A493G    C4242T   G7013A   C9557T   G12454A 

 9. Parsons                   DQ282449(Hispanic)      C1b
A493G    C4242T   G7013A   C9557T   G12454A  C14883T 

10. Parsons                   DQ282450(Hispanic)      C1b
A493G    C4242T   G7013A   C9557T   G12454A 

11. Parsons                   DQ282451(Hispanic)      C1b
A493G    C4242T   G7013A   C9557T   G12454A 

12. Parsons                   DQ282452(Hispanic)      C1b
A493G    C4242T   G7013A   C9557T   G12454A 

13. Parsons                   DQ282453(Hispanic)      C1b
A493G    C4242T   G7013A   C9557T  G12454A  C16223Y   

14. Parsons                   DQ282454(Hispanic)      C1b
A493G    C4242T   G7013A   C9557T   G12454A 

15. Parsons                   DQ282455(Hispanic)      C1b
A493G    C4242T   G7013A   C9557T   G12454A 

16. Parsons                   DQ282456(Hispanic)      C1b
A493G    C4242T   G7013A   C9557T   G12454A 

17. Parsons                   DQ282457(Hispanic)      C1b
A493G    C4242T   G7013A   C9557T   G12454A 

18. Parsons                   DQ282458.2(Hispanic)    C1b
A493G    C4242T   G7013A   C9557T   G12454A 

19. Parsons                   DQ282459(Hispanic)      C1c
G1888A   A12397G  G15930A 

20. Parsons                   DQ282460(Hispanic)      C1c
G1888A   G3316A   A4784G   C7948T   A8973G  A12193G  G15930A 

21. Parsons                   DQ282461(Hispanic)      C1b
A493G    T1005C   A5605G   A11989G  G15119A 

22. Parsons                   DQ282462(Hispanic)      C1c
T450C    T1055G   G1888A   G3010A   G11440A  T11794C  C14356T  G15930A 

23. Parsons                   DQ282463(Hispanic)      C1c
G1888A   A3948G   A8700T   T12696C  G15930A 

24. Parsons                   DQ282464(Hispanic)      C1b
A493G    A5664G   T6293C   G12630A 

25. Parsons                   DQ282465(Hispanic)      C1c
G1888A   T11617C  G15930A  G16526A 

26. Parsons                   DQ282466(Hispanic)      C1c
G1888A   G3010A   G11440A  T11794C  C14356T  G15930A 

27. Parsons                   DQ282467(Hispanic)      C1c
G1888A   G3010A   G11440A  T11794C  C14356T  G15930A  

28. Parsons                   DQ282468(Hispanic)      C1c
G1888A   G3010A   G11440A  T11794C  C14356T  G15930A 

29. Parsons                   DQ282469(Hispanic)      C1b
A493G    T1005C   G3357T   C7628A   A11989G  G15119A  C15790T 

30. Parsons                   DQ282470(Hispanic)      C1c
G1888A   G3010A   G11440A  T11794C  C14356T  G15930A  T16368C 

31. Parsons                   DQ282471(Hispanic)      C1c
G1888A   G3010A   G11440A  T11794C  C14356T  G15930A 

32. Parsons                   DQ282472(Hispanic)      C1d
G7697A   G9196A   A16051G  C16188T  G16204A  T16362C  C16527T 

33. Parsons                   DQ282473(Hispanic)      C1d
G7697A   A16051G  C16188T  G16204A  T16362C  C16527T 

34. Parsons                   DQ282474(Hispanic)      C1d
G7697A   A16051G  C16188T  G16204A  T16362C  C16527T 

35. Parsons                   DQ282475(Hispanic)      C1b
G143A    A493G    C4167T   T9530C   A14524G  T16086C  A16183-  T16189C  16193.1C 
16193.2N C16278T 

36. Parsons                   DQ282476(Hispanic)      C1b
G143A    A493G    C4167T   A14524G  T16086C  A16183-  T16189C  16193.1C 16193.2N 
C16278T 

37. Derenko                   EF153779                C1a
A93G     T3826C   T5774C   G7598A   T16356C 

38. Ingman_gyll               EU007858(Nanaitci)      C1a
A93G     C375T    T3826C   G7598A   T16093C  T16356C  

39. Tamm                      EU095527(Arsario)       C1c
G1888A   A3140G   G3705A   A4316G   T6815C   T7022A   C12545T  G15140A  T15479C 
G15497A  T15670C  G15930A  A16265G  G16319A 

40. Tamm                      EU095537(Coreguaje)     C1d
C194T    T1452C   A5836G   A6272G   G7697A   A8425G   C13770T  T15852C  G15884A 
A16051G  T16172C 

41. Tamm                      EU095544(Kogui)         C1c
G1888A   A3140G   G3705A   A4435G   T6815C   T7022A   T15479C  G15497A  T15670C 
G15930A  A16265G  G16319A 

42. Tamm                      EU095549(Wayuu)         C1b
T485C    A493G    A3768G   A5600G   A6872G   T13734C  T15465C 

43. FTDNA                     EU327891                C1c
G1888A   A9254G   C13839T  G15930A  C16114T 
 
44. FTDNA                     EU327973                C1c
G1888A   A6575G   C15740T  G15930R  T16093C  G16485A  G16490A  T16491C G16496A 

45. Kivisild                  DQ112789.2(America)     C1d     CODING AREA ONLY
G1719A   G7697A   G12501A  G15106A 

46. Kivisild                  DQ112846.2(America)     C1b     CODING AREA ONLY
A493G    G1719A   G7337A   T10084C  G11447A 

47. Kivisild                  DQ112888.2(America)     C1c     CODING AREA ONLY
G1888A   G12618A  A13321G  T13879C  T14581C  T15313C  G15930A 

48. Herrnstadt                EF657282 mtDNA145(Asia) C1b     CODING AREA ONLY
C4242T   G7013A   C9557T   G12454A 

49. Herrnstadt                EF657314 mtDNA174(Asia) C*      CODING AREA ONLY
A5894G   G6261A   C7985G   A10397G  G13813A  T14215C 

50. Herrnstadt                EF657317 mtDNA177(Asia) C1c     CODING AREA ONLY
G1888A   C10853T  C12092T  T12414C  T15670C  G15930A  

51. Herrnstadt                EF657324 mtDNA183(Asia) C1c     CODING AREA ONLY
G1888A   A12642G  A12978G  G15930A 

52. Hernstadt                 EF657329 mtDNA188(Asia) C1c     CODING AREA ONLY
G1888A   A12642G  A12978G  G15930A 

53. Herrnstadt                EF657355 mtDNA210(Asia) C1c     CODING AREA ONLY
G1888A   T2486C   A4315T   G12372A  A14769G  G15077A  G15119A  G15930A 

54. Herrnstadt                EF657504 mtDNA345(Asia) C1d     CODING AREA ONLY
G7697A   T15670C 

55. Herrnstadt                EF657547 mtDNA384(Asia) C1c     CODING AREA ONLY
G1888A   T11617C  G13359A  G15930A 

56. Herrnstadt                EF657584 mtDNA417(Asia) C1b     CODING AREA ONLY
T11147C

57. Herrnstadt                EF657588 mtDNA420(Asia) C1c     CODING AREA ONLY
G1888A   G2735A   A12978G  G15930A 

58. Fagundes        A29.JS    EU095222(Waiwai)      C1
C194T    G7697A   T8503C   T12879C  A16051G  T16311C  

59. Fagundes        A30.JS  EU095223(Zoro)          C1b
C114T    A493G    T8383C   G10586A  A12193G  T16093C  C16256T 

60. Fagundes        A31.JS    EU095224(Zoro)        C1b
C114T    A493G    T8383C   G10586A  A12193G  T16093C  

61. Fagundes        A32.JS    EU095225(Quechua)     C1b
A493G    C4014T   G4491A   T13656C  T16199C  A16254G 

62. Fagundes        A33.JS    EU095226(Quechua)     C1b
A493G    G6456A   C13545T  A16318C 

63. Fagundes        A34.JS    EU095227(Arara)       C1b
A493G    960.C    C3764T   G4924A   G8078A   C16292T  T16362C 

64. Fagundes        A35.JS    EU095228(Poturujara)  C1b
T195C    A493G    C5238T   T14788C 

65. Fagundes        A36.JS    EU095229(Yanomama)    C1b
A493G    T8848C   T13326C  T16271C  T16357C 

66. Fagundes        A37.JS    EU095230(Yanomama)    C1b
C441G    A493G    C568N    T8848C   T13326C  T16271C  T16357C 

67. Fagundes        A38.JS    EU095231(Yanomama)    C1b
A493G    T8848C   G10310A  T13326C  T16271C  T16357C 

68. Achilli

69. Achilli                   EU431086(Canada)      C1c
C150T    T152C    G1888A   T3394C   A4702G   T5162C   G7853A   G8251A   C15007T  G15930A  

70. Achilli                   EU431087(USA)         C1c
G1888A   A9254G   A15613G  G15930A  C16114T  T16357C  T16512C 

71. Hartmann EU597517(Mongolia, China HGDP01225)       Haplogroup C
A73G    T195C   A249.   A263G   309.C   309.C   315.C   T489C   A750G   A1438G  
C1715T  2232.A  A2706G  C3107N  T3552A  A4715G  A4769G  G6026A  C7028T  C7196A  
T7310C  T7999C  G8584A  A8701G  A8860G  T9540C  A9545G  A10398G C10400T T10873C 
G11719A G11914A G11969A A12672G C12705T A13263G C13583T T14318C C14766T T14783C 
G15043A T15204C G15301A A15326G A15487T T15968C C16114A G16129A C16223T C16291Y 
T16298C C16327T T16519C 

72. Hartmann EU597533(Pima, Mexico HGDP01037)          Haplogroup C
A73G    A215G   A249.   A263G   A290.   A291.   309.C   309.C   315.C   T489C   
A750G   A1438G  G1888A  A2706G  C3107N  T3552A  A4715G  A4769G  C7028T  C7196A  
G8584A  A8701G  A8860G  T9540C  A9545G  A10398G C10400T T10873C G11719A G11914A 
C12705T A12978G A13263G T14318C C14766T T14783C G15043A G15301A A15326G A15487T 
G15930A C16223T T16298C T16325C C16327T 

73. EU597542(Yakut, Siberia HGDP00947) Hartmann Haplogroup C
A73G    A249.   A263G   315.C   T489C   595.C   A750G   A1438G  A2706G  C3107N  
T3552A  G3591A  A4715G  A4769G  C4904T  C7028T  C7196A  C8140T  G8584A  A8701G  
A8860G  A9007G  T9540C  A9545G  A10398G C10400T T10873C G11719A G11914A C12705T 
A13263G T14318C C14766T T14783C G15043A G15301A A15326G A15487T C16223T C16261T 
T16288C T16298C T16519C 

74. FTDNA3 A44.JS   EU617323               Haplogroup C1c
A73G    A249.   A263G   A290.   A291.   309.C   315.C   T489C   A750G   A1438G  
G1888A  A2706G  T3552A  A4715G  A4769G  A6575G  C7028T  C7196A  G8584A  A8701G  
A8860G  T9540C  A9545G  A10398G C10400T T10873C G11719A G11914A C12705T A13263G 
T14318C C14766T T14783C G15043A G15301A A15326G A15487T C15740T G15930A T16093C 
C16223T T16298C T16325C C16327T G16485A G16490A T16491C G16496A T16519C 

75. FTDNA              GQ397486(Puerto Rico) C1b2a 09-AUG-2009
A73G A249- A290- A291- 315.1C T489C A493G C522- A523- A750G A1438G A2706G
T3552A C4242T A4715G A4769G G7013A C7028T C7196A G8584A A8701G A8860G T9540C 
A9545G C9557T A10398G C10400T T10873C G11719A G11914A G12454A C12705T A13263G
T14318C C14766T T14783C G15043A G15301A A15326G A15487T C16223T T16298C T16325C
C16327T T16519C 

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2009